Lots of GSEs now use "characteristics_ch*" for key-value pairs of
annotation. If that is the case, this simply cleans those up and transforms
the keys to column names and the values to column values.
Arguments
- data
A data.frame like object, tibble and data.table are also okay.
- columns
A character vector, should be ended with "(ch\d*)(\.\d*)?". these columns in
datawill be parsed. IfNULL, all columns started with"characteristics_ch"will be used.- sep
A string separating paired key-value, usually
":".- split
Passed to strsplit function. Default is ";"`.
Details
A characteristics annotation column usually contains multiple
key-value items, so we should first split these columns by split and then
extract key-value pairs. A new column will be added whose name is the first
group in the "(ch\d*)(\.\d*)?$" regex pattern of the orginal column name
connected with key element in key-value pair by string "_" and the new
column value is the character vector of value element in all key-value
pair.
Examples
if (require(Biobase)) {
gse53987 <- geo(
"gse53987",
gse_matrix = TRUE, add_gpl = FALSE,
pdata_from_soft = FALSE,
odir = tempdir()
)
gse53987_smp_info <- Biobase::pData(gse53987)
gse53987_smp_info$characteristics_ch1 <- stringr::str_replace_all(
gse53987_smp_info$characteristics_ch1,
"gender|race|pmi|ph|rin|tissue|disease state",
function(x) paste0("; ", x)
)
gse53987_smp_info <- parse_pdata(gse53987_smp_info)
gse53987_smp_info[grepl(
"^ch1_|characteristics_ch1", names(gse53987_smp_info)
)]
}
#> Downloading 1 GSE matrix file from FTP site
#> → Parsing 1 series matrix file of GSE53987
#> Warning: Cannot parse characteristic column correctly
#> ℹ Details see "characteristics_ch1" column in phenoData
#> ℹ Please use `parse_pdata()` or `parse_gsm_list()` function to convert it
#> manually if necessary!
#> ✔ Parsing 1 GSE series matrix successfully!
#> → Constructing <ExpressionSet>
#> ✔ Found Bioconductor annotation package for "GPL570"
#> ch1_age ch1_gender ch1_race ch1_pmi ch1_ph ch1_rin
#> GSM1304852 52 M W 23.50 6.70 6.3
#> GSM1304853 50 F W 11.70 6.40 6.8
#> GSM1304854 28 F W 22.30 6.30 7.7
#> GSM1304855 55 F W 17.50 6.40 7.6
#> GSM1304856 58 M W 27.70 6.80 7.0
#> GSM1304857 28 M W 27.40 6.20 7.7
#> GSM1304858 49 F W 21.50 6.70 8.2
#> GSM1304859 42 F W 31.20 6.50 5.6
#> GSM1304860 43 F W 31.90 6.70 6.3
#> GSM1304861 50 M W 12.10 6.70 7.4
#> GSM1304862 40 M W 18.50 6.40 6.5
#> GSM1304863 39 F W 22.20 6.70 7.9
#> GSM1304864 45 M W 27.20 7.10 8.1
#> GSM1304865 42 M W 12.50 6.70 8.2
#> GSM1304866 65 M W 8.90 6.70 6.6
#> GSM1304867 51 F W 21.50 6.70 7.0
#> GSM1304868 39 M W 24.20 6.60 7.8
#> GSM1304869 48 M W 18.10 6.90 7.0
#> GSM1304870 51 M W 24.20 6.60 7.8
#> GSM1304871 51 F W 7.80 6.60 7.2
#> GSM1304872 36 F W 14.50 6.40 8.0
#> GSM1304873 65 F W 18.50 6.50 7.0
#> GSM1304874 55 M W 28.00 6.10 6.8
#> GSM1304875 22 M W 20.10 6.80 7.1
#> GSM1304876 52 F W 22.60 7.10 7.0
#> GSM1304877 58 F W 22.70 6.40 6.3
#> GSM1304878 40 F B 16.60 6.80 7.9
#> GSM1304879 41 F W 15.40 6.60 8.5
#> GSM1304880 49 M W 21.20 6.50 7.8
#> GSM1304881 48 M W 21.68 6.60 7.3
#> GSM1304882 39 F W 24.50 6.80 8.2
#> GSM1304883 48 M W 24.50 6.50 7.0
#> GSM1304884 43 M W 13.80 6.60 7.6
#> GSM1304885 68 M W 11.80 6.80 6.1
#> GSM1304886 58 F W 18.80 6.60 7.2
#> GSM1304887 43 M W 22.30 6.70 7.9
#> GSM1304888 51 M W 24.60 6.50 7.7
#> GSM1304889 53 F W 11.90 6.70 8.1
#> GSM1304890 26 F W 13.40 6.40 7.5
#> GSM1304891 52 F W 10.30 6.50 6.6
#> GSM1304892 62 M W 26.00 6.50 6.8
#> GSM1304893 29 M W 26.60 6.90 7.8
#> GSM1304894 49 F W 23.40 6.40 6.2
#> GSM1304895 54 F W 17.90 6.20 6.1
#> GSM1304896 28 F B 24.80 6.60 8.2
#> GSM1304897 42 M W 14.30 6.40 6.2
#> GSM1304898 44 M W 19.30 6.50 6.3
#> GSM1304899 40 F W 22.20 6.60 8.0
#> GSM1304900 47 M W 24.00 6.60 5.5
#> GSM1304901 59 M W 13.00 6.60 7.2
#> GSM1304902 47 F W 22.30 6.60 6.5
#> GSM1304903 34 M W 24.40 6.60 8.4
#> GSM1304904 51 M W 28.30 7.30 7.0
#> GSM1304905 49 M W 21.50 5.97 6.0
#> GSM1304906 47 F W 14.37 6.35 6.3
#> GSM1304907 25 F B 20.10 6.73 5.6
#> GSM1304908 62 M W 22.70 7.14 6.3
#> GSM1304909 44 F W 24.50 6.63 7.8
#> GSM1304910 46 F W 23.80 6.61 6.9
#> GSM1304911 50 M W 11.00 6.23 7.2
#> GSM1304912 46 M W 15.80 6.19 6.2
#> GSM1304913 41 F W 20.10 6.27 6.7
#> GSM1304914 47 M W 28.90 6.58 6.7
#> GSM1304915 37 M B 5.98 6.07 6.4
#> GSM1304916 58 M W 7.70 6.22 6.7
#> GSM1304917 44 F B 18.70 6.20 6.4
#> GSM1304918 38 M W 28.80 6.56 6.6
#> GSM1304919 52 M B 27.10 6.68 6.3
#> GSM1304920 52 M W 23.50 6.70 7.2
#> GSM1304921 50 F W 11.70 6.40 8.6
#> GSM1304922 28 F W 22.30 6.30 8.6
#> GSM1304923 55 F W 17.50 6.40 8.0
#> GSM1304924 58 M W 27.70 6.80 7.5
#> GSM1304925 28 M W 27.40 6.20 7.9
#> GSM1304926 49 F W 21.50 6.70 8.1
#> GSM1304927 56 F W 24.50 6.10 6.9
#> GSM1304928 50 M W 12.10 6.70 7.6
#> GSM1304929 40 M W 18.50 6.40 7.9
#> GSM1304930 39 F W 22.20 6.70 7.8
#> GSM1304931 45 M W 27.20 7.10 7.3
#> GSM1304932 42 M W 12.50 6.70 7.6
#> GSM1304933 65 M W 8.90 6.70 6.9
#> GSM1304934 51 F W 21.50 6.70 7.7
#> GSM1304935 39 M W 24.20 6.60 7.3
#> GSM1304936 48 M W 18.10 6.90 8.2
#> GSM1304937 51 M W 24.20 6.60 7.9
#> GSM1304938 51 F W 7.80 6.60 8.6
#> GSM1304939 36 F W 14.50 6.40 8.6
#> GSM1304940 65 F W 18.50 6.50 8.3
#> GSM1304941 55 M W 28.00 6.10 7.9
#> GSM1304942 22 M W 20.10 6.80 8.1
#> GSM1304943 52 F W 22.60 7.10 8.2
#> GSM1304944 58 F W 22.70 6.40 8.0
#> GSM1304945 40 F B 16.60 6.80 8.2
#> GSM1304946 41 F W 15.40 6.60 8.2
#> GSM1304947 49 M W 21.20 6.50 7.9
#> GSM1304948 48 M W 21.68 6.60 7.5
#> GSM1304949 39 F W 24.50 6.80 7.4
#> GSM1304950 48 M W 24.50 6.50 6.8
#> GSM1304951 43 M W 13.80 6.60 7.5
#> GSM1304952 68 M W 11.80 6.80 6.7
#> GSM1304953 58 F W 18.80 6.60 8.7
#> GSM1304954 43 M W 22.30 6.70 8.0
#> GSM1304955 46 M W 22.00 6.30 6.6
#> GSM1304956 51 M W 24.60 6.50 7.8
#> GSM1304957 53 F W 11.90 6.70 8.4
#> GSM1304958 26 F W 13.40 6.40 8.4
#> GSM1304959 52 F W 10.30 6.50 8.1
#> GSM1304960 62 M W 26.00 6.50 7.8
#> GSM1304961 29 M W 26.60 6.90 8.2
#> GSM1304962 49 F W 23.40 6.40 7.6
#> GSM1304963 54 F W 17.90 6.20 7.5
#> GSM1304964 28 F B 24.80 6.60 7.9
#> GSM1304965 42 M W 14.30 6.40 8.4
#> GSM1304966 40 F W 22.20 6.60 7.7
#> GSM1304967 47 M W 24.00 6.60 6.8
#> GSM1304968 44 M W 11.00 6.50 7.2
#> GSM1304969 59 M W 13.00 6.60 7.7
#> GSM1304970 47 F W 22.30 6.60 6.7
#> GSM1304971 34 M W 24.40 6.60 7.8
#> GSM1304972 51 M W 28.30 7.30 7.7
#> GSM1304973 49 M W 21.50 5.97 7.0
#> GSM1304974 47 F W 14.37 6.35 9.0
#> GSM1304975 25 F B 20.10 6.73 7.2
#> GSM1304976 41 F W 17.10 6.90 8.3
#> GSM1304977 62 M W 22.70 7.14 8.1
#> GSM1304978 47 F B 20.10 7.30 8.1
#> GSM1304979 44 F W 24.50 6.63 7.6
#> GSM1304980 46 F W 23.80 6.61 8.0
#> GSM1304981 50 M W 11.00 6.23 8.4
#> GSM1304982 41 F W 20.10 6.27 7.4
#> GSM1304983 47 M W 28.90 6.58 7.0
#> GSM1304984 37 M B 5.98 6.07 6.3
#> GSM1304985 58 M W 7.70 6.22 7.3
#> GSM1304986 44 F B 18.70 6.20 7.6
#> GSM1304987 52 M B 27.10 6.68 7.4
#> GSM1304988 50 M W 12.10 6.70 8.6
#> GSM1304989 40 M W 18.50 6.40 8.4
#> GSM1304990 39 F W 22.20 6.70 9.1
#> GSM1304991 45 M W 27.20 7.10 8.7
#> GSM1304992 42 M W 12.50 6.70 8.7
#> GSM1304993 65 M W 8.90 6.70 8.3
#> GSM1304994 51 F W 21.50 6.70 8.4
#> GSM1304995 39 M W 24.20 6.60 8.5
#> GSM1304996 48 M W 18.10 6.90 8.8
#> GSM1304997 52 M W 23.50 6.70 9.1
#> GSM1304998 50 F W 11.70 6.40 8.4
#> GSM1304999 28 F W 22.30 6.30 9.0
#> GSM1305000 55 F W 17.50 6.40 6.0
#> GSM1305001 58 M W 27.70 6.80 6.6
#> GSM1305002 49 F W 21.50 6.70 8.7
#> GSM1305003 56 F W 24.50 6.10 7.7
#> GSM1305004 42 F W 31.20 6.50 6.8
#> GSM1305005 49 M W 21.20 6.50 8.4
#> GSM1305006 48 M W 21.68 6.60 7.5
#> GSM1305007 39 F W 24.50 6.80 7.5
#> GSM1305008 48 M W 24.50 6.50 7.6
#> GSM1305009 43 M W 13.80 6.60 8.7
#> GSM1305010 68 M W 11.80 6.80 8.5
#> GSM1305011 58 F W 18.80 6.60 8.6
#> GSM1305012 43 M W 22.30 6.70 8.5
#> GSM1305013 46 M W 22.00 6.30 7.0
#> GSM1305014 51 M W 24.20 6.60 8.3
#> GSM1305015 51 F W 7.80 6.60 9.0
#> GSM1305016 36 F W 14.50 6.40 9.3
#> GSM1305017 65 F W 18.50 6.50 7.4
#> GSM1305018 55 M W 28.00 6.10 7.6
#> GSM1305019 22 M W 20.10 6.80 7.4
#> GSM1305020 52 F W 22.60 7.10 8.8
#> GSM1305021 58 F W 22.70 6.40 9.0
#> GSM1305022 40 F B 16.60 6.80 8.7
#> GSM1305023 42 M W 14.30 6.40 8.7
#> GSM1305024 44 M W 19.30 6.50 8.5
#> GSM1305025 47 M W 24.00 6.60 7.3
#> GSM1305026 44 M W 11.00 6.50 7.7
#> GSM1305027 59 M W 13.00 6.60 8.4
#> GSM1305028 47 F W 22.30 6.60 8.2
#> GSM1305029 34 M W 24.40 6.60 9.1
#> GSM1305030 51 M W 28.30 7.30 8.6
#> GSM1305031 51 M W 24.60 6.50 8.3
#> GSM1305032 53 F W 11.90 6.70 8.8
#> GSM1305033 26 F W 13.40 6.40 9.2
#> GSM1305034 52 F W 10.30 6.50 6.7
#> GSM1305035 62 M W 26.00 6.50 7.5
#> GSM1305036 29 M W 26.60 6.90 9.2
#> GSM1305037 49 F W 23.40 6.40 6.7
#> GSM1305038 54 F W 17.90 6.20 9.0
#> GSM1305039 50 M W 11.00 6.23 8.5
#> GSM1305040 46 M W 15.80 6.19 7.8
#> GSM1305041 41 F W 20.10 6.27 8.6
#> GSM1305042 47 M W 28.90 6.58 8.4
#> GSM1305043 37 M B 5.98 6.07 6.9
#> GSM1305044 58 M W 7.70 6.22 6.7
#> GSM1305045 44 F B 18.70 6.20 6.9
#> GSM1305046 38 M W 28.80 6.56 6.8
#> GSM1305047 52 M B 27.10 6.68 8.5
#> GSM1305048 49 M W 21.50 5.97 8.4
#> GSM1305049 47 F W 14.37 6.35 8.9
#> GSM1305050 25 F B 20.10 6.73 7.3
#> GSM1305051 41 F W 17.10 6.90 7.3
#> GSM1305052 62 M W 22.70 7.14 7.8
#> GSM1305053 32 M W 30.80 6.18 7.1
#> GSM1305054 47 F B 20.10 7.30 8.8
#> GSM1305055 50 F B 22.90 6.25 8.0
#> GSM1305056 44 F W 24.50 6.63 9.0
#> ch1_tissue ch1_disease state
#> GSM1304852 hippocampus bipolar disorder
#> GSM1304853 hippocampus bipolar disorder
#> GSM1304854 hippocampus bipolar disorder
#> GSM1304855 hippocampus bipolar disorder
#> GSM1304856 hippocampus bipolar disorder
#> GSM1304857 hippocampus bipolar disorder
#> GSM1304858 hippocampus bipolar disorder
#> GSM1304859 hippocampus bipolar disorder
#> GSM1304860 hippocampus bipolar disorder
#> GSM1304861 hippocampus bipolar disorder
#> GSM1304862 hippocampus bipolar disorder
#> GSM1304863 hippocampus bipolar disorder
#> GSM1304864 hippocampus bipolar disorder
#> GSM1304865 hippocampus bipolar disorder
#> GSM1304866 hippocampus bipolar disorder
#> GSM1304867 hippocampus bipolar disorder
#> GSM1304868 hippocampus bipolar disorder
#> GSM1304869 hippocampus bipolar disorder
#> GSM1304870 hippocampus control
#> GSM1304871 hippocampus control
#> GSM1304872 hippocampus control
#> GSM1304873 hippocampus control
#> GSM1304874 hippocampus control
#> GSM1304875 hippocampus control
#> GSM1304876 hippocampus control
#> GSM1304877 hippocampus control
#> GSM1304878 hippocampus control
#> GSM1304879 hippocampus control
#> GSM1304880 hippocampus control
#> GSM1304881 hippocampus control
#> GSM1304882 hippocampus control
#> GSM1304883 hippocampus control
#> GSM1304884 hippocampus control
#> GSM1304885 hippocampus control
#> GSM1304886 hippocampus control
#> GSM1304887 hippocampus control
#> GSM1304888 hippocampus major depressive disorder
#> GSM1304889 hippocampus major depressive disorder
#> GSM1304890 hippocampus major depressive disorder
#> GSM1304891 hippocampus major depressive disorder
#> GSM1304892 hippocampus major depressive disorder
#> GSM1304893 hippocampus major depressive disorder
#> GSM1304894 hippocampus major depressive disorder
#> GSM1304895 hippocampus major depressive disorder
#> GSM1304896 hippocampus major depressive disorder
#> GSM1304897 hippocampus major depressive disorder
#> GSM1304898 hippocampus major depressive disorder
#> GSM1304899 hippocampus major depressive disorder
#> GSM1304900 hippocampus major depressive disorder
#> GSM1304901 hippocampus major depressive disorder
#> GSM1304902 hippocampus major depressive disorder
#> GSM1304903 hippocampus major depressive disorder
#> GSM1304904 hippocampus major depressive disorder
#> GSM1304905 hippocampus schizo
#> GSM1304906 hippocampus schizo
#> GSM1304907 hippocampus schizo
#> GSM1304908 hippocampus schizo
#> GSM1304909 hippocampus schizo
#> GSM1304910 hippocampus schizo
#> GSM1304911 hippocampus schizo
#> GSM1304912 hippocampus schizo
#> GSM1304913 hippocampus schizo
#> GSM1304914 hippocampus schizo
#> GSM1304915 hippocampus schizo
#> GSM1304916 hippocampus schizo
#> GSM1304917 hippocampus schizo
#> GSM1304918 hippocampus schizo
#> GSM1304919 hippocampus schizo
#> GSM1304920 Pre-frontal cortex (BA46) bipolar disorder
#> GSM1304921 Pre-frontal cortex (BA46) bipolar disorder
#> GSM1304922 Pre-frontal cortex (BA46) bipolar disorder
#> GSM1304923 Pre-frontal cortex (BA46) bipolar disorder
#> GSM1304924 Pre-frontal cortex (BA46) bipolar disorder
#> GSM1304925 Pre-frontal cortex (BA46) bipolar disorder
#> GSM1304926 Pre-frontal cortex (BA46) bipolar disorder
#> GSM1304927 Pre-frontal cortex (BA46) bipolar disorder
#> GSM1304928 Pre-frontal cortex (BA46) bipolar disorder
#> GSM1304929 Pre-frontal cortex (BA46) bipolar disorder
#> GSM1304930 Pre-frontal cortex (BA46) bipolar disorder
#> GSM1304931 Pre-frontal cortex (BA46) bipolar disorder
#> GSM1304932 Pre-frontal cortex (BA46) bipolar disorder
#> GSM1304933 Pre-frontal cortex (BA46) bipolar disorder
#> GSM1304934 Pre-frontal cortex (BA46) bipolar disorder
#> GSM1304935 Pre-frontal cortex (BA46) bipolar disorder
#> GSM1304936 Pre-frontal cortex (BA46) bipolar disorder
#> GSM1304937 Pre-frontal cortex (BA46) control
#> GSM1304938 Pre-frontal cortex (BA46) control
#> GSM1304939 Pre-frontal cortex (BA46) control
#> GSM1304940 Pre-frontal cortex (BA46) control
#> GSM1304941 Pre-frontal cortex (BA46) control
#> GSM1304942 Pre-frontal cortex (BA46) control
#> GSM1304943 Pre-frontal cortex (BA46) control
#> GSM1304944 Pre-frontal cortex (BA46) control
#> GSM1304945 Pre-frontal cortex (BA46) control
#> GSM1304946 Pre-frontal cortex (BA46) control
#> GSM1304947 Pre-frontal cortex (BA46) control
#> GSM1304948 Pre-frontal cortex (BA46) control
#> GSM1304949 Pre-frontal cortex (BA46) control
#> GSM1304950 Pre-frontal cortex (BA46) control
#> GSM1304951 Pre-frontal cortex (BA46) control
#> GSM1304952 Pre-frontal cortex (BA46) control
#> GSM1304953 Pre-frontal cortex (BA46) control
#> GSM1304954 Pre-frontal cortex (BA46) control
#> GSM1304955 Pre-frontal cortex (BA46) control
#> GSM1304956 Pre-frontal cortex (BA46) major depressive disorder
#> GSM1304957 Pre-frontal cortex (BA46) major depressive disorder
#> GSM1304958 Pre-frontal cortex (BA46) major depressive disorder
#> GSM1304959 Pre-frontal cortex (BA46) major depressive disorder
#> GSM1304960 Pre-frontal cortex (BA46) major depressive disorder
#> GSM1304961 Pre-frontal cortex (BA46) major depressive disorder
#> GSM1304962 Pre-frontal cortex (BA46) major depressive disorder
#> GSM1304963 Pre-frontal cortex (BA46) major depressive disorder
#> GSM1304964 Pre-frontal cortex (BA46) major depressive disorder
#> GSM1304965 Pre-frontal cortex (BA46) major depressive disorder
#> GSM1304966 Pre-frontal cortex (BA46) major depressive disorder
#> GSM1304967 Pre-frontal cortex (BA46) major depressive disorder
#> GSM1304968 Pre-frontal cortex (BA46) major depressive disorder
#> GSM1304969 Pre-frontal cortex (BA46) major depressive disorder
#> GSM1304970 Pre-frontal cortex (BA46) major depressive disorder
#> GSM1304971 Pre-frontal cortex (BA46) major depressive disorder
#> GSM1304972 Pre-frontal cortex (BA46) major depressive disorder
#> GSM1304973 Pre-frontal cortex (BA46) schizo
#> GSM1304974 Pre-frontal cortex (BA46) schizo
#> GSM1304975 Pre-frontal cortex (BA46) schizo
#> GSM1304976 Pre-frontal cortex (BA46) schizo
#> GSM1304977 Pre-frontal cortex (BA46) schizo
#> GSM1304978 Pre-frontal cortex (BA46) schizo
#> GSM1304979 Pre-frontal cortex (BA46) schizo
#> GSM1304980 Pre-frontal cortex (BA46) schizo
#> GSM1304981 Pre-frontal cortex (BA46) schizo
#> GSM1304982 Pre-frontal cortex (BA46) schizo
#> GSM1304983 Pre-frontal cortex (BA46) schizo
#> GSM1304984 Pre-frontal cortex (BA46) schizo
#> GSM1304985 Pre-frontal cortex (BA46) schizo
#> GSM1304986 Pre-frontal cortex (BA46) schizo
#> GSM1304987 Pre-frontal cortex (BA46) schizo
#> GSM1304988 Associative striatum bipolar disorder
#> GSM1304989 Associative striatum bipolar disorder
#> GSM1304990 Associative striatum bipolar disorder
#> GSM1304991 Associative striatum bipolar disorder
#> GSM1304992 Associative striatum bipolar disorder
#> GSM1304993 Associative striatum bipolar disorder
#> GSM1304994 Associative striatum bipolar disorder
#> GSM1304995 Associative striatum bipolar disorder
#> GSM1304996 Associative striatum bipolar disorder
#> GSM1304997 Associative striatum bipolar disorder
#> GSM1304998 Associative striatum bipolar disorder
#> GSM1304999 Associative striatum bipolar disorder
#> GSM1305000 Associative striatum bipolar disorder
#> GSM1305001 Associative striatum bipolar disorder
#> GSM1305002 Associative striatum bipolar disorder
#> GSM1305003 Associative striatum bipolar disorder
#> GSM1305004 Associative striatum bipolar disorder
#> GSM1305005 Associative striatum control
#> GSM1305006 Associative striatum control
#> GSM1305007 Associative striatum control
#> GSM1305008 Associative striatum control
#> GSM1305009 Associative striatum control
#> GSM1305010 Associative striatum control
#> GSM1305011 Associative striatum control
#> GSM1305012 Associative striatum control
#> GSM1305013 Associative striatum control
#> GSM1305014 Associative striatum control
#> GSM1305015 Associative striatum control
#> GSM1305016 Associative striatum control
#> GSM1305017 Associative striatum control
#> GSM1305018 Associative striatum control
#> GSM1305019 Associative striatum control
#> GSM1305020 Associative striatum control
#> GSM1305021 Associative striatum control
#> GSM1305022 Associative striatum control
#> GSM1305023 Associative striatum major depressive disorder
#> GSM1305024 Associative striatum major depressive disorder
#> GSM1305025 Associative striatum major depressive disorder
#> GSM1305026 Associative striatum major depressive disorder
#> GSM1305027 Associative striatum major depressive disorder
#> GSM1305028 Associative striatum major depressive disorder
#> GSM1305029 Associative striatum major depressive disorder
#> GSM1305030 Associative striatum major depressive disorder
#> GSM1305031 Associative striatum major depressive disorder
#> GSM1305032 Associative striatum major depressive disorder
#> GSM1305033 Associative striatum major depressive disorder
#> GSM1305034 Associative striatum major depressive disorder
#> GSM1305035 Associative striatum major depressive disorder
#> GSM1305036 Associative striatum major depressive disorder
#> GSM1305037 Associative striatum major depressive disorder
#> GSM1305038 Associative striatum major depressive disorder
#> GSM1305039 Associative striatum schizo
#> GSM1305040 Associative striatum schizo
#> GSM1305041 Associative striatum schizo
#> GSM1305042 Associative striatum schizo
#> GSM1305043 Associative striatum schizo
#> GSM1305044 Associative striatum schizo
#> GSM1305045 Associative striatum schizo
#> GSM1305046 Associative striatum schizo
#> GSM1305047 Associative striatum schizo
#> GSM1305048 Associative striatum schizo
#> GSM1305049 Associative striatum schizo
#> GSM1305050 Associative striatum schizo
#> GSM1305051 Associative striatum schizo
#> GSM1305052 Associative striatum schizo
#> GSM1305053 Associative striatum schizo
#> GSM1305054 Associative striatum schizo
#> GSM1305055 Associative striatum schizo
#> GSM1305056 Associative striatum schizo
#> characteristics_ch1
#> GSM1304852 age: 52; gender: M; race: W; pmi: 23.5; ph: 6.7; rin: 6.3; tissue: hippocampus; disease state: bipolar disorder
#> GSM1304853 age: 50; gender: F; race: W; pmi: 11.7; ph: 6.4; rin: 6.8; tissue: hippocampus; disease state: bipolar disorder
#> GSM1304854 age: 28; gender: F; race: W; pmi: 22.3; ph: 6.3; rin: 7.7; tissue: hippocampus; disease state: bipolar disorder
#> GSM1304855 age: 55; gender: F; race: W; pmi: 17.5; ph: 6.4; rin: 7.6; tissue: hippocampus; disease state: bipolar disorder
#> GSM1304856 age: 58; gender: M; race: W; pmi: 27.7; ph: 6.8; rin: 7; tissue: hippocampus; disease state: bipolar disorder
#> GSM1304857 age: 28; gender: M; race: W; pmi: 27.4; ph: 6.2; rin: 7.7; tissue: hippocampus; disease state: bipolar disorder
#> GSM1304858 age: 49; gender: F; race: W; pmi: 21.5; ph: 6.7; rin: 8.2; tissue: hippocampus; disease state: bipolar disorder
#> GSM1304859 age: 42; gender: F; race: W; pmi: 31.2; ph: 6.5; rin: 5.6; tissue: hippocampus; disease state: bipolar disorder
#> GSM1304860 age: 43; gender: F; race: W; pmi: 31.9; ph: 6.7; rin: 6.3; tissue: hippocampus; disease state: bipolar disorder
#> GSM1304861 age: 50; gender: M; race: W; pmi: 12.1; ph: 6.7; rin: 7.4; tissue: hippocampus; disease state: bipolar disorder
#> GSM1304862 age: 40; gender: M; race: W; pmi: 18.5; ph: 6.4; rin: 6.5; tissue: hippocampus; disease state: bipolar disorder
#> GSM1304863 age: 39; gender: F; race: W; pmi: 22.2; ph: 6.7; rin: 7.9; tissue: hippocampus; disease state: bipolar disorder
#> GSM1304864 age: 45; gender: M; race: W; pmi: 27.2; ph: 7.1; rin: 8.1; tissue: hippocampus; disease state: bipolar disorder
#> GSM1304865 age: 42; gender: M; race: W; pmi: 12.5; ph: 6.7; rin: 8.2; tissue: hippocampus; disease state: bipolar disorder
#> GSM1304866 age: 65; gender: M; race: W; pmi: 8.9; ph: 6.7; rin: 6.6; tissue: hippocampus; disease state: bipolar disorder
#> GSM1304867 age: 51; gender: F; race: W; pmi: 21.5; ph: 6.7; rin: 7; tissue: hippocampus; disease state: bipolar disorder
#> GSM1304868 age: 39; gender: M; race: W; pmi: 24.2; ph: 6.6; rin: 7.8; tissue: hippocampus; disease state: bipolar disorder
#> GSM1304869 age: 48; gender: M; race: W; pmi: 18.1; ph: 6.9; rin: 7; tissue: hippocampus; disease state: bipolar disorder
#> GSM1304870 age: 51; gender: M; race: W; pmi: 24.2; ph: 6.6; rin: 7.8; tissue: hippocampus; disease state: control
#> GSM1304871 age: 51; gender: F; race: W; pmi: 7.8; ph: 6.6; rin: 7.2; tissue: hippocampus; disease state: control
#> GSM1304872 age: 36; gender: F; race: W; pmi: 14.5; ph: 6.4; rin: 8; tissue: hippocampus; disease state: control
#> GSM1304873 age: 65; gender: F; race: W; pmi: 18.5; ph: 6.5; rin: 7; tissue: hippocampus; disease state: control
#> GSM1304874 age: 55; gender: M; race: W; pmi: 28; ph: 6.1; rin: 6.8; tissue: hippocampus; disease state: control
#> GSM1304875 age: 22; gender: M; race: W; pmi: 20.1; ph: 6.8; rin: 7.1; tissue: hippocampus; disease state: control
#> GSM1304876 age: 52; gender: F; race: W; pmi: 22.6; ph: 7.1; rin: 7; tissue: hippocampus; disease state: control
#> GSM1304877 age: 58; gender: F; race: W; pmi: 22.7; ph: 6.4; rin: 6.3; tissue: hippocampus; disease state: control
#> GSM1304878 age: 40; gender: F; race: B; pmi: 16.6; ph: 6.8; rin: 7.9; tissue: hippocampus; disease state: control
#> GSM1304879 age: 41; gender: F; race: W; pmi: 15.4; ph: 6.6; rin: 8.5; tissue: hippocampus; disease state: control
#> GSM1304880 age: 49; gender: M; race: W; pmi: 21.2; ph: 6.5; rin: 7.8; tissue: hippocampus; disease state: control
#> GSM1304881 age: 48; gender: M; race: W; pmi: 21.68; ph: 6.6; rin: 7.3; tissue: hippocampus; disease state: control
#> GSM1304882 age: 39; gender: F; race: W; pmi: 24.5; ph: 6.8; rin: 8.2; tissue: hippocampus; disease state: control
#> GSM1304883 age: 48; gender: M; race: W; pmi: 24.5; ph: 6.5; rin: 7; tissue: hippocampus; disease state: control
#> GSM1304884 age: 43; gender: M; race: W; pmi: 13.8; ph: 6.6; rin: 7.6; tissue: hippocampus; disease state: control
#> GSM1304885 age: 68; gender: M; race: W; pmi: 11.8; ph: 6.8; rin: 6.1; tissue: hippocampus; disease state: control
#> GSM1304886 age: 58; gender: F; race: W; pmi: 18.8; ph: 6.6; rin: 7.2; tissue: hippocampus; disease state: control
#> GSM1304887 age: 43; gender: M; race: W; pmi: 22.3; ph: 6.7; rin: 7.9; tissue: hippocampus; disease state: control
#> GSM1304888 age: 51; gender: M; race: W; pmi: 24.6; ph: 6.5; rin: 7.7; tissue: hippocampus; disease state: major depressive disorder
#> GSM1304889 age: 53; gender: F; race: W; pmi: 11.9; ph: 6.7; rin: 8.1; tissue: hippocampus; disease state: major depressive disorder
#> GSM1304890 age: 26; gender: F; race: W; pmi: 13.4; ph: 6.4; rin: 7.5; tissue: hippocampus; disease state: major depressive disorder
#> GSM1304891 age: 52; gender: F; race: W; pmi: 10.3; ph: 6.5; rin: 6.6; tissue: hippocampus; disease state: major depressive disorder
#> GSM1304892 age: 62; gender: M; race: W; pmi: 26; ph: 6.5; rin: 6.8; tissue: hippocampus; disease state: major depressive disorder
#> GSM1304893 age: 29; gender: M; race: W; pmi: 26.6; ph: 6.9; rin: 7.8; tissue: hippocampus; disease state: major depressive disorder
#> GSM1304894 age: 49; gender: F; race: W; pmi: 23.4; ph: 6.4; rin: 6.2; tissue: hippocampus; disease state: major depressive disorder
#> GSM1304895 age: 54; gender: F; race: W; pmi: 17.9; ph: 6.2; rin: 6.1; tissue: hippocampus; disease state: major depressive disorder
#> GSM1304896 age: 28; gender: F; race: B; pmi: 24.8; ph: 6.6; rin: 8.2; tissue: hippocampus; disease state: major depressive disorder
#> GSM1304897 age: 42; gender: M; race: W; pmi: 14.3; ph: 6.4; rin: 6.2; tissue: hippocampus; disease state: major depressive disorder
#> GSM1304898 age: 44; gender: M; race: W; pmi: 19.3; ph: 6.5; rin: 6.3; tissue: hippocampus; disease state: major depressive disorder
#> GSM1304899 age: 40; gender: F; race: W; pmi: 22.2; ph: 6.6; rin: 8; tissue: hippocampus; disease state: major depressive disorder
#> GSM1304900 age: 47; gender: M; race: W; pmi: 24; ph: 6.6; rin: 5.5; tissue: hippocampus; disease state: major depressive disorder
#> GSM1304901 age: 59; gender: M; race: W; pmi: 13; ph: 6.6; rin: 7.2; tissue: hippocampus; disease state: major depressive disorder
#> GSM1304902 age: 47; gender: F; race: W; pmi: 22.3; ph: 6.6; rin: 6.5; tissue: hippocampus; disease state: major depressive disorder
#> GSM1304903 age: 34; gender: M; race: W; pmi: 24.4; ph: 6.6; rin: 8.4; tissue: hippocampus; disease state: major depressive disorder
#> GSM1304904 age: 51; gender: M; race: W; pmi: 28.3; ph: 7.3; rin: 7; tissue: hippocampus; disease state: major depressive disorder
#> GSM1304905 age: 49; gender: M; race: W; pmi: 21.5; ph: 5.97; rin: 6; tissue: hippocampus; disease state: schizo; phrenia
#> GSM1304906 age: 47; gender: F; race: W; pmi: 14.37; ph: 6.35; rin: 6.3; tissue: hippocampus; disease state: schizo; phrenia
#> GSM1304907 age: 25; gender: F; race: B; pmi: 20.1; ph: 6.73; rin: 5.6; tissue: hippocampus; disease state: schizo; phrenia
#> GSM1304908 age: 62; gender: M; race: W; pmi: 22.7; ph: 7.14; rin: 6.3; tissue: hippocampus; disease state: schizo; phrenia
#> GSM1304909 age: 44; gender: F; race: W; pmi: 24.5; ph: 6.63; rin: 7.8; tissue: hippocampus; disease state: schizo; phrenia
#> GSM1304910 age: 46; gender: F; race: W; pmi: 23.8; ph: 6.61; rin: 6.9; tissue: hippocampus; disease state: schizo; phrenia
#> GSM1304911 age: 50; gender: M; race: W; pmi: 11; ph: 6.23; rin: 7.2; tissue: hippocampus; disease state: schizo; phrenia
#> GSM1304912 age: 46; gender: M; race: W; pmi: 15.8; ph: 6.19; rin: 6.2; tissue: hippocampus; disease state: schizo; phrenia
#> GSM1304913 age: 41; gender: F; race: W; pmi: 20.1; ph: 6.27; rin: 6.7; tissue: hippocampus; disease state: schizo; phrenia
#> GSM1304914 age: 47; gender: M; race: W; pmi: 28.9; ph: 6.58; rin: 6.7; tissue: hippocampus; disease state: schizo; phrenia
#> GSM1304915 age: 37; gender: M; race: B; pmi: 5.98; ph: 6.07; rin: 6.4; tissue: hippocampus; disease state: schizo; phrenia
#> GSM1304916 age: 58; gender: M; race: W; pmi: 7.7; ph: 6.22; rin: 6.7; tissue: hippocampus; disease state: schizo; phrenia
#> GSM1304917 age: 44; gender: F; race: B; pmi: 18.7; ph: 6.2; rin: 6.4; tissue: hippocampus; disease state: schizo; phrenia
#> GSM1304918 age: 38; gender: M; race: W; pmi: 28.8; ph: 6.56; rin: 6.6; tissue: hippocampus; disease state: schizo; phrenia
#> GSM1304919 age: 52; gender: M; race: B; pmi: 27.1; ph: 6.68; rin: 6.3; tissue: hippocampus; disease state: schizo; phrenia
#> GSM1304920 age: 52; gender: M; race: W; pmi: 23.5; ph: 6.7; rin: 7.2; tissue: Pre-frontal cortex (BA46); disease state: bipolar disorder
#> GSM1304921 age: 50; gender: F; race: W; pmi: 11.7; ph: 6.4; rin: 8.6; tissue: Pre-frontal cortex (BA46); disease state: bipolar disorder
#> GSM1304922 age: 28; gender: F; race: W; pmi: 22.3; ph: 6.3; rin: 8.6; tissue: Pre-frontal cortex (BA46); disease state: bipolar disorder
#> GSM1304923 age: 55; gender: F; race: W; pmi: 17.5; ph: 6.4; rin: 8; tissue: Pre-frontal cortex (BA46); disease state: bipolar disorder
#> GSM1304924 age: 58; gender: M; race: W; pmi: 27.7; ph: 6.8; rin: 7.5; tissue: Pre-frontal cortex (BA46); disease state: bipolar disorder
#> GSM1304925 age: 28; gender: M; race: W; pmi: 27.4; ph: 6.2; rin: 7.9; tissue: Pre-frontal cortex (BA46); disease state: bipolar disorder
#> GSM1304926 age: 49; gender: F; race: W; pmi: 21.5; ph: 6.7; rin: 8.1; tissue: Pre-frontal cortex (BA46); disease state: bipolar disorder
#> GSM1304927 age: 56; gender: F; race: W; pmi: 24.5; ph: 6.1; rin: 6.9; tissue: Pre-frontal cortex (BA46); disease state: bipolar disorder
#> GSM1304928 age: 50; gender: M; race: W; pmi: 12.1; ph: 6.7; rin: 7.6; tissue: Pre-frontal cortex (BA46); disease state: bipolar disorder
#> GSM1304929 age: 40; gender: M; race: W; pmi: 18.5; ph: 6.4; rin: 7.9; tissue: Pre-frontal cortex (BA46); disease state: bipolar disorder
#> GSM1304930 age: 39; gender: F; race: W; pmi: 22.2; ph: 6.7; rin: 7.8; tissue: Pre-frontal cortex (BA46); disease state: bipolar disorder
#> GSM1304931 age: 45; gender: M; race: W; pmi: 27.2; ph: 7.1; rin: 7.3; tissue: Pre-frontal cortex (BA46); disease state: bipolar disorder
#> GSM1304932 age: 42; gender: M; race: W; pmi: 12.5; ph: 6.7; rin: 7.6; tissue: Pre-frontal cortex (BA46); disease state: bipolar disorder
#> GSM1304933 age: 65; gender: M; race: W; pmi: 8.9; ph: 6.7; rin: 6.9; tissue: Pre-frontal cortex (BA46); disease state: bipolar disorder
#> GSM1304934 age: 51; gender: F; race: W; pmi: 21.5; ph: 6.7; rin: 7.7; tissue: Pre-frontal cortex (BA46); disease state: bipolar disorder
#> GSM1304935 age: 39; gender: M; race: W; pmi: 24.2; ph: 6.6; rin: 7.3; tissue: Pre-frontal cortex (BA46); disease state: bipolar disorder
#> GSM1304936 age: 48; gender: M; race: W; pmi: 18.1; ph: 6.9; rin: 8.2; tissue: Pre-frontal cortex (BA46); disease state: bipolar disorder
#> GSM1304937 age: 51; gender: M; race: W; pmi: 24.2; ph: 6.6; rin: 7.9; tissue: Pre-frontal cortex (BA46); disease state: control
#> GSM1304938 age: 51; gender: F; race: W; pmi: 7.8; ph: 6.6; rin: 8.6; tissue: Pre-frontal cortex (BA46); disease state: control
#> GSM1304939 age: 36; gender: F; race: W; pmi: 14.5; ph: 6.4; rin: 8.6; tissue: Pre-frontal cortex (BA46); disease state: control
#> GSM1304940 age: 65; gender: F; race: W; pmi: 18.5; ph: 6.5; rin: 8.3; tissue: Pre-frontal cortex (BA46); disease state: control
#> GSM1304941 age: 55; gender: M; race: W; pmi: 28; ph: 6.1; rin: 7.9; tissue: Pre-frontal cortex (BA46); disease state: control
#> GSM1304942 age: 22; gender: M; race: W; pmi: 20.1; ph: 6.8; rin: 8.1; tissue: Pre-frontal cortex (BA46); disease state: control
#> GSM1304943 age: 52; gender: F; race: W; pmi: 22.6; ph: 7.1; rin: 8.2; tissue: Pre-frontal cortex (BA46); disease state: control
#> GSM1304944 age: 58; gender: F; race: W; pmi: 22.7; ph: 6.4; rin: 8; tissue: Pre-frontal cortex (BA46); disease state: control
#> GSM1304945 age: 40; gender: F; race: B; pmi: 16.6; ph: 6.8; rin: 8.2; tissue: Pre-frontal cortex (BA46); disease state: control
#> GSM1304946 age: 41; gender: F; race: W; pmi: 15.4; ph: 6.6; rin: 8.2; tissue: Pre-frontal cortex (BA46); disease state: control
#> GSM1304947 age: 49; gender: M; race: W; pmi: 21.2; ph: 6.5; rin: 7.9; tissue: Pre-frontal cortex (BA46); disease state: control
#> GSM1304948 age: 48; gender: M; race: W; pmi: 21.68; ph: 6.6; rin: 7.5; tissue: Pre-frontal cortex (BA46); disease state: control
#> GSM1304949 age: 39; gender: F; race: W; pmi: 24.5; ph: 6.8; rin: 7.4; tissue: Pre-frontal cortex (BA46); disease state: control
#> GSM1304950 age: 48; gender: M; race: W; pmi: 24.5; ph: 6.5; rin: 6.8; tissue: Pre-frontal cortex (BA46); disease state: control
#> GSM1304951 age: 43; gender: M; race: W; pmi: 13.8; ph: 6.6; rin: 7.5; tissue: Pre-frontal cortex (BA46); disease state: control
#> GSM1304952 age: 68; gender: M; race: W; pmi: 11.8; ph: 6.8; rin: 6.7; tissue: Pre-frontal cortex (BA46); disease state: control
#> GSM1304953 age: 58; gender: F; race: W; pmi: 18.8; ph: 6.6; rin: 8.7; tissue: Pre-frontal cortex (BA46); disease state: control
#> GSM1304954 age: 43; gender: M; race: W; pmi: 22.3; ph: 6.7; rin: 8; tissue: Pre-frontal cortex (BA46); disease state: control
#> GSM1304955 age: 46; gender: M; race: W; pmi: 22; ph: 6.3; rin: 6.6; tissue: Pre-frontal cortex (BA46); disease state: control
#> GSM1304956 age: 51; gender: M; race: W; pmi: 24.6; ph: 6.5; rin: 7.8; tissue: Pre-frontal cortex (BA46); disease state: major depressive disorder
#> GSM1304957 age: 53; gender: F; race: W; pmi: 11.9; ph: 6.7; rin: 8.4; tissue: Pre-frontal cortex (BA46); disease state: major depressive disorder
#> GSM1304958 age: 26; gender: F; race: W; pmi: 13.4; ph: 6.4; rin: 8.4; tissue: Pre-frontal cortex (BA46); disease state: major depressive disorder
#> GSM1304959 age: 52; gender: F; race: W; pmi: 10.3; ph: 6.5; rin: 8.1; tissue: Pre-frontal cortex (BA46); disease state: major depressive disorder
#> GSM1304960 age: 62; gender: M; race: W; pmi: 26; ph: 6.5; rin: 7.8; tissue: Pre-frontal cortex (BA46); disease state: major depressive disorder
#> GSM1304961 age: 29; gender: M; race: W; pmi: 26.6; ph: 6.9; rin: 8.2; tissue: Pre-frontal cortex (BA46); disease state: major depressive disorder
#> GSM1304962 age: 49; gender: F; race: W; pmi: 23.4; ph: 6.4; rin: 7.6; tissue: Pre-frontal cortex (BA46); disease state: major depressive disorder
#> GSM1304963 age: 54; gender: F; race: W; pmi: 17.9; ph: 6.2; rin: 7.5; tissue: Pre-frontal cortex (BA46); disease state: major depressive disorder
#> GSM1304964 age: 28; gender: F; race: B; pmi: 24.8; ph: 6.6; rin: 7.9; tissue: Pre-frontal cortex (BA46); disease state: major depressive disorder
#> GSM1304965 age: 42; gender: M; race: W; pmi: 14.3; ph: 6.4; rin: 8.4; tissue: Pre-frontal cortex (BA46); disease state: major depressive disorder
#> GSM1304966 age: 40; gender: F; race: W; pmi: 22.2; ph: 6.6; rin: 7.7; tissue: Pre-frontal cortex (BA46); disease state: major depressive disorder
#> GSM1304967 age: 47; gender: M; race: W; pmi: 24; ph: 6.6; rin: 6.8; tissue: Pre-frontal cortex (BA46); disease state: major depressive disorder
#> GSM1304968 age: 44; gender: M; race: W; pmi: 11; ph: 6.5; rin: 7.2; tissue: Pre-frontal cortex (BA46); disease state: major depressive disorder
#> GSM1304969 age: 59; gender: M; race: W; pmi: 13; ph: 6.6; rin: 7.7; tissue: Pre-frontal cortex (BA46); disease state: major depressive disorder
#> GSM1304970 age: 47; gender: F; race: W; pmi: 22.3; ph: 6.6; rin: 6.7; tissue: Pre-frontal cortex (BA46); disease state: major depressive disorder
#> GSM1304971 age: 34; gender: M; race: W; pmi: 24.4; ph: 6.6; rin: 7.8; tissue: Pre-frontal cortex (BA46); disease state: major depressive disorder
#> GSM1304972 age: 51; gender: M; race: W; pmi: 28.3; ph: 7.3; rin: 7.7; tissue: Pre-frontal cortex (BA46); disease state: major depressive disorder
#> GSM1304973 age: 49; gender: M; race: W; pmi: 21.5; ph: 5.97; rin: 7; tissue: Pre-frontal cortex (BA46); disease state: schizo; phrenia
#> GSM1304974 age: 47; gender: F; race: W; pmi: 14.37; ph: 6.35; rin: 9; tissue: Pre-frontal cortex (BA46); disease state: schizo; phrenia
#> GSM1304975 age: 25; gender: F; race: B; pmi: 20.1; ph: 6.73; rin: 7.2; tissue: Pre-frontal cortex (BA46); disease state: schizo; phrenia
#> GSM1304976 age: 41; gender: F; race: W; pmi: 17.1; ph: 6.9; rin: 8.3; tissue: Pre-frontal cortex (BA46); disease state: schizo; phrenia
#> GSM1304977 age: 62; gender: M; race: W; pmi: 22.7; ph: 7.14; rin: 8.1; tissue: Pre-frontal cortex (BA46); disease state: schizo; phrenia
#> GSM1304978 age: 47; gender: F; race: B; pmi: 20.1; ph: 7.3; rin: 8.1; tissue: Pre-frontal cortex (BA46); disease state: schizo; phrenia
#> GSM1304979 age: 44; gender: F; race: W; pmi: 24.5; ph: 6.63; rin: 7.6; tissue: Pre-frontal cortex (BA46); disease state: schizo; phrenia
#> GSM1304980 age: 46; gender: F; race: W; pmi: 23.8; ph: 6.61; rin: 8; tissue: Pre-frontal cortex (BA46); disease state: schizo; phrenia
#> GSM1304981 age: 50; gender: M; race: W; pmi: 11; ph: 6.23; rin: 8.4; tissue: Pre-frontal cortex (BA46); disease state: schizo; phrenia
#> GSM1304982 age: 41; gender: F; race: W; pmi: 20.1; ph: 6.27; rin: 7.4; tissue: Pre-frontal cortex (BA46); disease state: schizo; phrenia
#> GSM1304983 age: 47; gender: M; race: W; pmi: 28.9; ph: 6.58; rin: 7; tissue: Pre-frontal cortex (BA46); disease state: schizo; phrenia
#> GSM1304984 age: 37; gender: M; race: B; pmi: 5.98; ph: 6.07; rin: 6.3; tissue: Pre-frontal cortex (BA46); disease state: schizo; phrenia
#> GSM1304985 age: 58; gender: M; race: W; pmi: 7.7; ph: 6.22; rin: 7.3; tissue: Pre-frontal cortex (BA46); disease state: schizo; phrenia
#> GSM1304986 age: 44; gender: F; race: B; pmi: 18.7; ph: 6.2; rin: 7.6; tissue: Pre-frontal cortex (BA46); disease state: schizo; phrenia
#> GSM1304987 age: 52; gender: M; race: B; pmi: 27.1; ph: 6.68; rin: 7.4; tissue: Pre-frontal cortex (BA46); disease state: schizo; phrenia
#> GSM1304988 age: 50; gender: M; race: W; pmi: 12.1; ph: 6.7; rin: 8.6; tissue: Associative striatum; disease state: bipolar disorder
#> GSM1304989 age: 40; gender: M; race: W; pmi: 18.5; ph: 6.4; rin: 8.4; tissue: Associative striatum; disease state: bipolar disorder
#> GSM1304990 age: 39; gender: F; race: W; pmi: 22.2; ph: 6.7; rin: 9.1; tissue: Associative striatum; disease state: bipolar disorder
#> GSM1304991 age: 45; gender: M; race: W; pmi: 27.2; ph: 7.1; rin: 8.7; tissue: Associative striatum; disease state: bipolar disorder
#> GSM1304992 age: 42; gender: M; race: W; pmi: 12.5; ph: 6.7; rin: 8.7; tissue: Associative striatum; disease state: bipolar disorder
#> GSM1304993 age: 65; gender: M; race: W; pmi: 8.9; ph: 6.7; rin: 8.3; tissue: Associative striatum; disease state: bipolar disorder
#> GSM1304994 age: 51; gender: F; race: W; pmi: 21.5; ph: 6.7; rin: 8.4; tissue: Associative striatum; disease state: bipolar disorder
#> GSM1304995 age: 39; gender: M; race: W; pmi: 24.2; ph: 6.6; rin: 8.5; tissue: Associative striatum; disease state: bipolar disorder
#> GSM1304996 age: 48; gender: M; race: W; pmi: 18.1; ph: 6.9; rin: 8.8; tissue: Associative striatum; disease state: bipolar disorder
#> GSM1304997 age: 52; gender: M; race: W; pmi: 23.5; ph: 6.7; rin: 9.1; tissue: Associative striatum; disease state: bipolar disorder
#> GSM1304998 age: 50; gender: F; race: W; pmi: 11.7; ph: 6.4; rin: 8.4; tissue: Associative striatum; disease state: bipolar disorder
#> GSM1304999 age: 28; gender: F; race: W; pmi: 22.3; ph: 6.3; rin: 9; tissue: Associative striatum; disease state: bipolar disorder
#> GSM1305000 age: 55; gender: F; race: W; pmi: 17.5; ph: 6.4; rin: 6; tissue: Associative striatum; disease state: bipolar disorder
#> GSM1305001 age: 58; gender: M; race: W; pmi: 27.7; ph: 6.8; rin: 6.6; tissue: Associative striatum; disease state: bipolar disorder
#> GSM1305002 age: 49; gender: F; race: W; pmi: 21.5; ph: 6.7; rin: 8.7; tissue: Associative striatum; disease state: bipolar disorder
#> GSM1305003 age: 56; gender: F; race: W; pmi: 24.5; ph: 6.1; rin: 7.7; tissue: Associative striatum; disease state: bipolar disorder
#> GSM1305004 age: 42; gender: F; race: W; pmi: 31.2; ph: 6.5; rin: 6.8; tissue: Associative striatum; disease state: bipolar disorder
#> GSM1305005 age: 49; gender: M; race: W; pmi: 21.2; ph: 6.5; rin: 8.4; tissue: Associative striatum; disease state: control
#> GSM1305006 age: 48; gender: M; race: W; pmi: 21.68; ph: 6.6; rin: 7.5; tissue: Associative striatum; disease state: control
#> GSM1305007 age: 39; gender: F; race: W; pmi: 24.5; ph: 6.8; rin: 7.5; tissue: Associative striatum; disease state: control
#> GSM1305008 age: 48; gender: M; race: W; pmi: 24.5; ph: 6.5; rin: 7.6; tissue: Associative striatum; disease state: control
#> GSM1305009 age: 43; gender: M; race: W; pmi: 13.8; ph: 6.6; rin: 8.7; tissue: Associative striatum; disease state: control
#> GSM1305010 age: 68; gender: M; race: W; pmi: 11.8; ph: 6.8; rin: 8.5; tissue: Associative striatum; disease state: control
#> GSM1305011 age: 58; gender: F; race: W; pmi: 18.8; ph: 6.6; rin: 8.6; tissue: Associative striatum; disease state: control
#> GSM1305012 age: 43; gender: M; race: W; pmi: 22.3; ph: 6.7; rin: 8.5; tissue: Associative striatum; disease state: control
#> GSM1305013 age: 46; gender: M; race: W; pmi: 22; ph: 6.3; rin: 7; tissue: Associative striatum; disease state: control
#> GSM1305014 age: 51; gender: M; race: W; pmi: 24.2; ph: 6.6; rin: 8.3; tissue: Associative striatum; disease state: control
#> GSM1305015 age: 51; gender: F; race: W; pmi: 7.8; ph: 6.6; rin: 9; tissue: Associative striatum; disease state: control
#> GSM1305016 age: 36; gender: F; race: W; pmi: 14.5; ph: 6.4; rin: 9.3; tissue: Associative striatum; disease state: control
#> GSM1305017 age: 65; gender: F; race: W; pmi: 18.5; ph: 6.5; rin: 7.4; tissue: Associative striatum; disease state: control
#> GSM1305018 age: 55; gender: M; race: W; pmi: 28; ph: 6.1; rin: 7.6; tissue: Associative striatum; disease state: control
#> GSM1305019 age: 22; gender: M; race: W; pmi: 20.1; ph: 6.8; rin: 7.4; tissue: Associative striatum; disease state: control
#> GSM1305020 age: 52; gender: F; race: W; pmi: 22.6; ph: 7.1; rin: 8.8; tissue: Associative striatum; disease state: control
#> GSM1305021 age: 58; gender: F; race: W; pmi: 22.7; ph: 6.4; rin: 9; tissue: Associative striatum; disease state: control
#> GSM1305022 age: 40; gender: F; race: B; pmi: 16.6; ph: 6.8; rin: 8.7; tissue: Associative striatum; disease state: control
#> GSM1305023 age: 42; gender: M; race: W; pmi: 14.3; ph: 6.4; rin: 8.7; tissue: Associative striatum; disease state: major depressive disorder
#> GSM1305024 age: 44; gender: M; race: W; pmi: 19.3; ph: 6.5; rin: 8.5; tissue: Associative striatum; disease state: major depressive disorder
#> GSM1305025 age: 47; gender: M; race: W; pmi: 24; ph: 6.6; rin: 7.3; tissue: Associative striatum; disease state: major depressive disorder
#> GSM1305026 age: 44; gender: M; race: W; pmi: 11; ph: 6.5; rin: 7.7; tissue: Associative striatum; disease state: major depressive disorder
#> GSM1305027 age: 59; gender: M; race: W; pmi: 13; ph: 6.6; rin: 8.4; tissue: Associative striatum; disease state: major depressive disorder
#> GSM1305028 age: 47; gender: F; race: W; pmi: 22.3; ph: 6.6; rin: 8.2; tissue: Associative striatum; disease state: major depressive disorder
#> GSM1305029 age: 34; gender: M; race: W; pmi: 24.4; ph: 6.6; rin: 9.1; tissue: Associative striatum; disease state: major depressive disorder
#> GSM1305030 age: 51; gender: M; race: W; pmi: 28.3; ph: 7.3; rin: 8.6; tissue: Associative striatum; disease state: major depressive disorder
#> GSM1305031 age: 51; gender: M; race: W; pmi: 24.6; ph: 6.5; rin: 8.3; tissue: Associative striatum; disease state: major depressive disorder
#> GSM1305032 age: 53; gender: F; race: W; pmi: 11.9; ph: 6.7; rin: 8.8; tissue: Associative striatum; disease state: major depressive disorder
#> GSM1305033 age: 26; gender: F; race: W; pmi: 13.4; ph: 6.4; rin: 9.2; tissue: Associative striatum; disease state: major depressive disorder
#> GSM1305034 age: 52; gender: F; race: W; pmi: 10.3; ph: 6.5; rin: 6.7; tissue: Associative striatum; disease state: major depressive disorder
#> GSM1305035 age: 62; gender: M; race: W; pmi: 26; ph: 6.5; rin: 7.5; tissue: Associative striatum; disease state: major depressive disorder
#> GSM1305036 age: 29; gender: M; race: W; pmi: 26.6; ph: 6.9; rin: 9.2; tissue: Associative striatum; disease state: major depressive disorder
#> GSM1305037 age: 49; gender: F; race: W; pmi: 23.4; ph: 6.4; rin: 6.7; tissue: Associative striatum; disease state: major depressive disorder
#> GSM1305038 age: 54; gender: F; race: W; pmi: 17.9; ph: 6.2; rin: 9; tissue: Associative striatum; disease state: major depressive disorder
#> GSM1305039 age: 50; gender: M; race: W; pmi: 11; ph: 6.23; rin: 8.5; tissue: Associative striatum; disease state: schizo; phrenia
#> GSM1305040 age: 46; gender: M; race: W; pmi: 15.8; ph: 6.19; rin: 7.8; tissue: Associative striatum; disease state: schizo; phrenia
#> GSM1305041 age: 41; gender: F; race: W; pmi: 20.1; ph: 6.27; rin: 8.6; tissue: Associative striatum; disease state: schizo; phrenia
#> GSM1305042 age: 47; gender: M; race: W; pmi: 28.9; ph: 6.58; rin: 8.4; tissue: Associative striatum; disease state: schizo; phrenia
#> GSM1305043 age: 37; gender: M; race: B; pmi: 5.98; ph: 6.07; rin: 6.9; tissue: Associative striatum; disease state: schizo; phrenia
#> GSM1305044 age: 58; gender: M; race: W; pmi: 7.7; ph: 6.22; rin: 6.7; tissue: Associative striatum; disease state: schizo; phrenia
#> GSM1305045 age: 44; gender: F; race: B; pmi: 18.7; ph: 6.2; rin: 6.9; tissue: Associative striatum; disease state: schizo; phrenia
#> GSM1305046 age: 38; gender: M; race: W; pmi: 28.8; ph: 6.56; rin: 6.8; tissue: Associative striatum; disease state: schizo; phrenia
#> GSM1305047 age: 52; gender: M; race: B; pmi: 27.1; ph: 6.68; rin: 8.5; tissue: Associative striatum; disease state: schizo; phrenia
#> GSM1305048 age: 49; gender: M; race: W; pmi: 21.5; ph: 5.97; rin: 8.4; tissue: Associative striatum; disease state: schizo; phrenia
#> GSM1305049 age: 47; gender: F; race: W; pmi: 14.37; ph: 6.35; rin: 8.9; tissue: Associative striatum; disease state: schizo; phrenia
#> GSM1305050 age: 25; gender: F; race: B; pmi: 20.1; ph: 6.73; rin: 7.3; tissue: Associative striatum; disease state: schizo; phrenia
#> GSM1305051 age: 41; gender: F; race: W; pmi: 17.1; ph: 6.9; rin: 7.3; tissue: Associative striatum; disease state: schizo; phrenia
#> GSM1305052 age: 62; gender: M; race: W; pmi: 22.7; ph: 7.14; rin: 7.8; tissue: Associative striatum; disease state: schizo; phrenia
#> GSM1305053 age: 32; gender: M; race: W; pmi: 30.8; ph: 6.18; rin: 7.1; tissue: Associative striatum; disease state: schizo; phrenia
#> GSM1305054 age: 47; gender: F; race: B; pmi: 20.1; ph: 7.3; rin: 8.8; tissue: Associative striatum; disease state: schizo; phrenia
#> GSM1305055 age: 50; gender: F; race: B; pmi: 22.9; ph: 6.25; rin: 8; tissue: Associative striatum; disease state: schizo; phrenia
#> GSM1305056 age: 44; gender: F; race: W; pmi: 24.5; ph: 6.63; rin: 9; tissue: Associative striatum; disease state: schizo; phrenia